#!/bin/bash


You can find the 99% credible sets (fine mapping) for schizophrenia (PGC NG 2014) , bipolar disorder (Stahl NG 2019), and Intelligence (Savage 2018 NG)

The columns for the files are:
chr
variant position - 1
variant position (hg19)
variant name (hg19 chr:pos:ref:alt or rsid)
index variant for the locus
ln(bayes factor)
PPA (causal probability for the variant at the locus)


99% credible sets were already available for Schizophrenia, so I took the PGC fine mapping and re-formatted it to be similar to the ones I generated for Intelligence and bipolar disorder