Index of /wholemousebrain/Supplementary_Tables

	Name	Last modified	Size	Description
	Parent Directory		-
	wmb_meta.tsv	2023-11-20 21:14	32K
	Subclass.names.map.csv	2023-11-18 22:28	41K
	SI Table 25 Deep learning model performance on cell types.txt	2023-11-01 12:39	11K
	SI Table 24 Motif enrichment of differentially accessible transposable-element related cCREs.xlsx	2023-11-01 12:38	24K
	SI Table 23 Differential chromatin accessibility of transposable-element related cCREs correlated with synaptic genes.xlsx	2023-11-01 12:37	25K
	SI Table 22GO analysis of the genes positively correlated with TE-cCREs.xlsx	2023-11-01 12:37	195K
	SI Table 21 The eigen-vector centrality scores for 403 transcription factors in each of the 267 cell subclasses based on their gene regulatory networks.txt	2023-11-01 12:36	1.5M
	SI Table 20 Region information of the cell subclasses for network motif analysis.csv	2023-11-01 12:36	15K
	SI Table 19 Counts of the network motifs in the mouse brain regions.txt	2023-11-01 12:35	284K
	SI Table 18 Counts of the network motifs in all the cell-subclass gene regulatory networks.xlsx	2023-11-01 12:35	47K
	SI Table 17 Summary of gene regulatory networks in all the cell subclasses/	2023-11-02 10:59	-
	SI Table 16 Known motif enrichment in putative enhancers/	2023-11-02 10:59	-
	SI Table 15 Module assignment of the cell subclasses used in the putative enhancer module analysis.txt	2023-11-01 12:32	5.7K
	SI Table 14 Module assignment of the putative enhancers in the non-negative matrix factorization.txt	2023-11-01 12:32	7.2M
	SI Table 13 Summary of all the gene-cCRE correlations/	2023-11-02 10:59	-
	SI Table 12 Summary of all the co-accessible cCRE pairs.txt	2023-11-01 12:29	15K
	SI Table 11 Association of cis regulatory modules with cell subclasses.txt	2023-11-01 12:28	5.8K
	SI Table 10 Module assignments of all the cCREs in the non-negative matrix factorization.tsv	2023-10-16 12:42	27M
	SI Table 9 List of cCREs having no overlaps with the ENCODE DHSs.bed	2023-10-07 11:26	21M
	SI Table 8 List of number of cCREs per cell subtype and cell subclass.xlsx	2023-11-01 12:26	55K
	SI Table 7 List of the genomic locations of all the cCREs.bed	2023-09-29 11:18	48M
	SI Table 6 Cell-subtype specific cCREs.csv	2023-10-18 11:41	2.9G
	SI Table 5 Transfer label scores for the integration of the snATAC-seq with the scRNA-seq data. Both cluster and subclass level scores are presented/	2023-11-02 10:59	-
	SI Table 4 L4-level annotation based on the integration analysis with scRNA-seq data including major region information.xlsx	2023-11-01 12:22	80K
	SI Table 3 Metadata table for clustering, including resolution parameters and full name of the annotations.xlsx	2023-11-01 12:21	59K
	SI Table 2 Metadata table for all the 2.3 million nuclei in the snATAC-seq data.txt	2023-10-16 14:33	348M
	SI Table 1 Sample and dissection summary.xlsx	2023-11-01 12:19	29K
	2023-03-05453B-SI Guide.docx	2023-11-02 10:56	15K